/*
 * Copyright 2009 BioTeam Inc
 * 
 * Licensed under License GNU LESSER GENERAL PUBLIC LICENSE version 3.0 (the "License"); you may not
 * use this file except in compliance with the License. You may obtain a copy of
 * the License at
 * 
 * http://www.gnu.org/copyleft/lesser.html
 * 
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
 * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
 * License for the specific language governing permissions and limitations under
 * the License.
 */
package net.bioteam.appweb.model;

public class ExampleProgramModifier implements ProgramModifier {

	public void modifyProgram(Program program) {
		if (!(program.getName().equals("blastall"))) {
			return;
		}

		Parameter parameter = program.getParameter("protein_db");
		Vlist vlist = new Vlist();
		vlist.getLabel().add("drosoph.aa");
		vlist.getValue().add("drosoph.aa");
		vlist.getLabel().add("nr");
		vlist.getValue().add("nr");
		vlist.getLabel().add("swissprot");
		vlist.getValue().add("swissprot");

		parameter.setVlist(vlist);
		parameter = program.getParameter("nucleotid_db");
		 vlist=new Vlist();
         vlist.getLabel().add("drosoph.nt");
         vlist.getValue().add("drosoph.nt");
         vlist.getLabel().add("nt");
         vlist.getValue().add("nt");
         vlist.getLabel().add("wgs");
         vlist.getValue().add("wgs");
         parameter.setVlist(vlist);

	}

}
